Gene detail

Detailed information of ANN22158-RA in Montipora grisea

Genomic Location: Scaffold_18__1_contigs__length_5111168:2475104...2475400
NR annotation: MXZ00344.1, RNA-binding protein [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9WX37	Putative RNA-binding protein RbpE OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbpE PE=3 SV=3
Q9WX39	Putative RNA-binding protein RbpF OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbpF PE=3 SV=3
Q9FGS0	RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050502	Family	Eukaryotic RNA-binding	Interproscan
IPR048289	Domain	NsCP33-like, RNA recognition motif 2	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48025	OS02G0815200 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan