Detailed information of ANN22162-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:43955807...43957174
NR annotation: XP_022801675.1, F-box/LRR-repeat protein 2-like [Stylophora pistillata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NXK8F-box/LRR-repeat protein 12 OS=Homo sapiens OX=9606 GN=FBXL12 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009282 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|F-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937
all species →
F-box-likeF-box-likeDomainInterproscan
PF13516
all species →
LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001810
all species →
DomainF-box domainInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR006553
all species →
RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16134
all species →
F-BOX/TPR REPEAT PROTEIN POF3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0019005
all species →
Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146
all species →
Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN22162-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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