Gene detail

Detailed information of ANN22270-RA in Nanomia septata

Genomic Location: chr8:127505321...127521889
NR annotation: XP_012564728.2, uncharacterized protein LOC105849002 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN22270-RA

atgaataataaaaaCAACTATTCTAAAGTGAAAAGATATCTTAGACTGTGGACAGACCCTGAAATTAGTGATGTCGTTAAAATCATATTATACCACAAGAGAGGTGGTATTACTTGTTGCGTCCCGAAATGCTATAACAATAGTCAACGCCACAAAGACATAAGGTTTTATGTTATTCCAAAAGATCCGTCATTGCGAAAGAAATGGATGCACACTATCAGCCGAAAAGATTTTAAAACTCCAGGAAGTTCTCATCGTGTATGTTCGGCACATTTTGAAGGCGGAAAGAAGACTTATGATAACAACATCCCGACAATAACGCCAAAGCTAATTAAACAGCCGAAAATAAAGCTGCGAAGAACAGGCAATAGTTCTGGCCGAAGAGTCACTATCGAAGACTTAGAAATGAACTTAGAAGACTTCAAAGATCCACATAGCCTTTGCAAAATTATTGACACTGATGCTGAacttgttttagaaaaattaatttccaaaattgtcATTACTGAAAGCCAAAATAAACTCATCGAACAGGGACAAGAAATTCAAAACTTGAAAAACATGGTGCAAAAACACAAATTTGGCATCGATCGATTCAAACACAATCAAGAACACTTCAAATTTTATAGCGGTTTCGATAGCTATAGTCAGTTTAAATGTTTTTTAGAGTATCTACAGCCAGCAGATAACTATCTTCTATACTGGGGAAATTCTAAGGCTGATATAGGAAGTTACGAGCCTACTGAAAAAAAAGGCTGGAAGAGTAAGATCTTTAACCCCAGAAGAAGAGTTATTTCTGACTTTATGCCGATTACGTTGCAACTACCCAATAGTAGATCTTGGTATTCGGTACGACATCTCATCCAGCAATGTCAGCAGGATTCTTGTTACTTGaaaaaatttaaagggaaacgaggattaaatattcatcttggacgcagtcccaattgcagaagaaatctccctgattcgtctaagccttctgatagtcatgattcttccattccacaaaaggtctcatgtactatcaaatctccttcaacatctgttgaaagtttaaatgccatttgtcgtaatagcattaattctaaatttactaaacataaatcttctgtatgcaaactctgtccatcttttattcttaatgacaaattcgtcagtacttcaacacatagaatacacaactctattgtgcctgacacaaccaagtctgttacttgtaacagcaaaaacgttatttatttgataacatgcaagaaatatggcctacaatatgtgggagagactatccaaccactctcaggtaggatatgtcatcatgtttcacgcattaacaacacacatgttagtcattcttcgcagattcttgccaatcactttaactcagggcactgtaagggtgcttccttctctgtcaacataattgaaaaactatctggtgatggcagaggggaagatggaaaattggatcctatcatgaatggatgcttaaacttcgaacagtgtttccatatggtctcaatgacagggtgggagacgaatacatggaaaatcgagaccatgatatcatcttttccaagtttccatctctggtcaaaatcaaagaacgttttaagggtattattatcctctctaaagcgttcactatgtcgtaaactatatgatagtatcaccacatttctttcaaataaacatgagaattaccgtttttctcaattctttctagctgctcttgatattgtgaagttcaaaataggtactccaaacatagttaacaaacccattaaaaaattaccttccaatatctgtcgtatcatttttgtcaataaagccatagactttattaatcccaatagaatactcaaaaataatgacgttgtagaagatcttccccctcaccttagggaggaatcgcccatgattgtatacaatctcaccaagactacacatgtggatgcctttctacaggataactcaattctaccctgtgattgtgctaattcaccatttaagagtgatcatcatggccacataatcacaggagatttagacattgtacaacatgacaaacttaaactccttctttgtaaagggcctaaatatcgtgaacctaaaaggttttcttttcctgaagccaaaagtagcatattgcagggtattgatgaatgcatctctgcttggagtaacaagcacaaaattcctatcacatattttaaaaaatggagagaacatatttcactcaaaattgatgatcttaaagacaaaaaaactgttgggacagtaaaaaatgccagtttgaaattttacttagaccgtaagaatgttcctgccttgtccttaactattACCCGTgtagaaataactttttaa

Transcript

ANN22270-RA

ATGAATAATAAAAACAACTATTCTAAAGTGAAAAGATATCTTAGACTGTGGACAGACCCTGAAATTAGTGATGTCGTTAAAATCATATTATACCACAAGAGAGGTGGTATTACTTGTTGCGTCCCGAAATGCTATAACAATAGTCAACGCCACAAAGACATAAGGTTTTATGTTATTCCAAAAGATCCGTCATTGCGAAAGAAATGGATGCACACTATCAGCCGAAAAGATTTTAAAACTCCAGGAAGTTCTCATCGTGTATGTTCGGCACATTTTGAAGGCGGAAAGAAGACTTATGATAACAACATCCCGACAATAACGCCAAAGCTAATTAAACAGCCGAAAATAAAGCTGCGAAGAACAGGCAATAGTTCTGGCCGAAGAGTCACTATCGAAGACTTAGAAATGAACTTAGAAGACTTCAAAGATCCACATAGCCTTTGCAAAATTATTGACACTGATGCTGAACTTGTTTTAGAAAAATTAATTTCCAAAATTGTCATTACTGAAAGCCAAAATAAACTCATCGAACAGGGACAAGAAATTCAAAACTTGAAAAACATGGTGCAAAAACACAAATTTGGCATCGATCGATTCAAACACAATCAAGAACACTTCAAATTTTATAGCGGTTTCGATAGCTATAGTCAGTTTAAATGTTTTTTAGAGTATCTACAGCCAGCAGATAACTATCTTCTATACTGGGGAAATTCTAAGGCTGATATAGGAAGTTACGAGCCTACTGAAAAAAAAGGCTGGAAGAGTAAGATCTTTAACCCCAGAAGAAGAGTTATTTCTGACTTTATGCCGATTACGTTGCAACTACCCAATAGTAGATCTTGGTATTCGGTACGACATCTCATCCAGCAATGTCAGCAGGATTCTTGTTACTTGAAAAAATTTAAAGGGAAACGAGGATTAAATATTCATCTTGGACGCAGTCCCAATTGCAGAAGAAATCTCCCTGATTCGTCTAAGCCTTCTGATAGTCATGATTCTTCCATTCCACAAAAGGTCTCATGTACTATCAAATCTCCTTCAACATCTGTTGAAAGTTTAAATGCCATTTGTCGTAATAGCATTAATTCTAAATTTACTAAACATAAATCTTCTGTATGCAAACTCTGTCCATCTTTTATTCTTAATGACAAATTCGTCAGTACTTCAACACATAGAATACACAACTCTATTGTGCCTGACACAACCAAGTCTGTTACTTGTAACAGCAAAAACGTTATTTATTTGATAACATGCAAGAAATATGGCCTACAATATGTGGGAGAGACTATCCAACCACTCTCAGGTAGGATATGTCATCATGTTTCACGCATTAACAACACACATGTTAGTCATTCTTCGCAGATTCTTGCCAATCACTTTAACTCAGGGCACTGTAAGGGTGCTTCCTTCTCTGTCAACATAATTGAAAAACTATCTGGTGATGGCAGAGGGGAAGATGGAAAATTGGATCCTATCATGAATGGATGCTTAAACTTCGAACAGTGTTTCCATATGGTCTCAATGACAGGGTGGGAGACGAATACATGGAAAATCGAGACCATGATATCATCTTTTCCAAGTTTCCATCTCTGGTCAAAATCAAAGAACGTTTTAAGGGTATTATTATCCTCTCTAAAGCGTTCACTATGTCGTAAACTATATGATAGTATCACCACATTTCTTTCAAATAAACATGAGAATTACCGTTTTTCTCAATTCTTTCTAGCTGCTCTTGATATTGTGAAGTTCAAAATAGGTACTCCAAACATAGTTAACAAACCCATTAAAAAATTACCTTCCAATATCTGTCGTATCATTTTTGTCAATAAAGCCATAGACTTTATTAATCCCAATAGAATACTCAAAAATAATGACGTTGTAGAAGATCTTCCCCCTCACCTTAGGGAGGAATCGCCCATGATTGTATACAATCTCACCAAGACTACACATGTGGATGCCTTTCTACAGGATAACTCAATTCTACCCTGTGATTGTGCTAATTCACCATTTAAGAGTGATCATCATGGCCACATAATCACAGGAGATTTAGACATTGTACAACATGACAAACTTAAACTCCTTCTTTGTAAAGGGCCTAAATATCGTGAACCTAAAAGGTTTTCTTTTCCTGAAGCCAAAAGTAGCATATTGCAGGGTATTGATGAATGCATCTCTGCTTGGAGTAACAAGCACAAAATTCCTATCACATATTTTAAAAAATGGAGAGAACATATTTCACTCAAAATTGATGATCTTAAAGACAAAAAAACTGTTGGGACAGTAAAAAATGCCAGTTTGAAATTTTACTTAGACCGTAAGAATGTTCCTGCCTTGTCCTTAACTATTACCCGTGTAGAAATAACTTTTTAA

Protein

Uniprot

Uniprot term	Description
Q6TGZ4	THAP domain-containing protein 11 OS=Danio rerio OX=7955 GN=thap11 PE=2 SV=2
A5PKF5	THAP domain-containing protein 11 OS=Bos taurus OX=9913 GN=THAP11 PE=2 SV=1
Q9JJD0	THAP domain-containing protein 11 OS=Mus musculus OX=10090 GN=Thap11 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR035901	Homologous_superfamily	GIY-YIG endonuclease superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22794	THAP DOMAIN PROTEIN 11	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan