Gene detail

Detailed information of ANN22284-RA in Montipora grisea

Genomic Location: Scaffold_18__1_contigs__length_5111168:4943833...4946466
NR annotation: MYB95678.1, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN22284-RA

ATGTCCCAAATTACCTTTGTTTTGTCGCTATGTGCACTCCTGATTATTCCCAGCCTCAGTATCGCTAATGTTGCAGAAGATGGACTTGTCGCTTATTGGCCCTTTGACGAGGGCAAGGGTAAAGAAGTCATAGATGTCACAGGCAACGGACACGACGGAGAATTTAACGATGATCCCAGGTGGGTTGAGGGAAAGTTTGGCACCGGACTCGAATTTGATGGCGAGAACGACCATGTCATTGTTGCAGACGATCCGGCCTTCGCAATCGAGGAGAATATTACCTTAATGGCGTGGTTCAGTCCAAACGATGTCCTTACCGGTCACCGCTTAATGAGCAAAAATAACGCCATCTTCGTCATCTTCGACTTCGGCAATAAAGACAGTATCGACTTTCTGGTCAAACCGAACAACACCTTTGCTGAATCTACAACAACCGATTGGAAGGTTGGCGAATGGTATCATTTTGCAGGGACGTTCGATGGAAAGACGTTGAAGGTTTACATAAACGGTAAACTTGAAGGCGATGCTGCCAACAATGTACCAATTGCTCCATCCAACTTAGACCTCTGGATTGGTGGTGATGATCTCGGCAACGCCACCGACCACTTCCCCGGGAAAATTGATGAAGTCCGACTTTATGAGAAAACCTTGAGCGAAGCCGACATCCAAAAAGTTATGGAGATACCACAGGATGTGGAAGCGCGTGGAAAACTCACCACAACGTGGGGAAAATTGAAGGAAGGAATTTGCATGGCGACCCATCAAAAACGCCCCGTCGTTCTCATCATTCGAGACGGTTGGGGCAGTAATCCGTACCTCGAATTTCAGCACGCGAACGCCGTTCATCTTGCAAAAACACCTGTAGATGATTGGCTTCGACAGAACTATTCAAATGTCCTCATCCATACCTCCGGTGAAGATGTCGGTTTACCGGCTGGTGTTATCGGCAACAGCGAAGTCGGGCATCAGAACATCGGCGCAGGACGCATCGTGAACCAAGAACTCCGCCGTATCAGCACTATGATCCGTTCCGGTGAATTTGCTCAGAACGAAGTCCTTCTGGACGCGATTGCCCATGTTAAAAGGCATGGAACACATCTCCACCTCATGGGATTGGCAAGTGATGCTGGCGTTCACAGTTCGCTTGAACACCTCTATGGACTGCTTACACTCGCTAAGGCGAACGGACTCAAAACTAACCAAGTTTTTATTCACAATTTCAGCGATGGACGTGATTGCCAACCTGATCTGGGTATCCAATTCTGTGAGCAGATTGAGGCGAAATTGAAAGAGATCGGTATCGGGCAGATAGCTTCCGTTGTCGGGCGTTATTATGCAATGGATCGGGATGACCGATGGGAACGCGTTGAGGTGGCGTACCGCCTCTTAACCGAAGGTGTCGGGGATTGTGTCGCTACTGCCACAGATGCCTATCGAGATTACTATGACAACCCGGATGACACCAACCGTAAAGGAGACGAGTTTGTCCGGCCCTCTGTAGTGCTTGGAACTGACGGGAAACCTCTCCCTCAGATCGCAGATGGGGATGCTGTTGTTTTCTATAACTTCCGAGGCGATCGACCCCGAGAACTCACCAAAGCCTTTTGTCTTGATGAATTTCCGTTTGAAGCAGAAGGGAAAGACGGTGTAAAGCGAGAAATGGGTTTTAAACGGAATTGTAAGCCTGACGTTAAGTTTGTTACAATGACCGAGTACGAGCAAGGAATGCTTGTTGAAGCGGCGGTCAAAAAACCACCGAAAATGCAGAACACCCTCGGTGTTTATATCAGTGAGGCCGGACTCACGCAGTTCCGATGTGCAGAGACTGAGAAATTTCCACACGTTACCTTCTTTTTCAACGACTATCGAGATGAACCTTACGAAGGTGAAGATCGGCAAATCATCGCTTCTCCACGTGACGTAACGACCTACGACCAGAAACCGGAGATGGCCGCACCCAGTGTGACCTTGGAGATGCTGCGTCGGATCGGATCCGATAAATATGATTTGATCGTACTCAACTATGCCAATGGCGATATGGTGGGACATACAGGTTCCCTTCCAGCTGCTATTAAGGCAGTTGAGGCAGTTGACGCTGGTGTTGGGAGAATTGTTGATGCCGTGCTTAAAAAGGATGGCGCGCTCATTGTCACCGCGGATCATGGAAACTGTGAGCAGATGATTGATCCCGATACCGGCGGTATCCACACTGCACATACCACGTATGATGTGGATCTCATCATTGTTGATAACCAACACAAGAGGCAACAACTCCGTGAAGGTGGGCGACTTGCCGACATCGCACCCACAGCACTCCGCCTCCTCGGTTTAGATCAACCTACTGAGATGACAGGTGAATCACTAATTTATTAG

Transcript

ANN22284-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7UFG7	2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=gpmI PE=3 SV=1
A6LR07	2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=gpmI PE=3 SV=1
Q0STD7	2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens (strain SM101 / Type A) OX=289380 GN=gpmI PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003305 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13385 all species →	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan
PF01676 all species →	Metalloenzyme	Metalloenzyme superfamily	Family	Interproscan
PF06415 all species →	iPGM_N	BPG-independent PGAM N-terminus (iPGM_N)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005995 all species →	Family	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR017850 all species →	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR006124 all species →	Domain	Metalloenzyme	Interproscan
IPR006558 all species →	Domain	LamG-like jellyroll fold	Interproscan
IPR036646 all species →	Homologous_superfamily	BPG-independent phosphoglycerate mutase, domain B superfamily	Interproscan
IPR011258 all species →	Domain	BPG-independent PGAM, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31637 all species →	2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004619 all species →	Molecular Function	phosphoglycerate mutase activity	Interproscan
GO:0006007 all species →	Biological Process	glucose catabolic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030145 all species →	Molecular Function	manganese ion binding	Interproscan
GO:0044262 all species →	Biological Process	obsolete cellular carbohydrate metabolic process	Interproscan
GO:0046537 all species →	Molecular Function	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15633	gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	EC:5.4.2.12	Glycine, serine and threonine metabolism	ko00260	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.