Gene detail

Detailed information of ANN22301-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:1254649...1260302
NR annotation: CAH3126778.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN22301-RA

ATGGACGAAGAAGCAAGTTCAGTTGTTCTTATGCCCGAGGTTAAGGTTGAAACTTTTGAAAACTCTGAAAACCATCCCGATAGCGAAGGAAGTTCGCTTGGAAGTCCAACAGATGAAAATTCATTGCCGCGTTTTGGCGAAACCTCGGAGGAAGATATTCAACGATTGTTGGAGCACCGTTCATGCAGTGAAAACACATGGCGAGCGACTAAAAATGCCGTGAAAATTCTCCGAGACTACATGGAAGAGAAAAGTATGGATGTTAACTTTGAGAACCTGGACAAGCAAGCGTTGAATGACCTTTTGCGTAAATTTTACGTCGAAGCGCGTAAAAAGAATGGAGATTATTACAAATCCTCTGCCTTGGGGAGCATACGTTTTGGGATTCATCGGTACTTACAGTCACAACAGAGGAATATAGACATCAGAAACGACCCTGAATTTACCGAGTCCAACAAAATATTCAAAGCCCAGGTCATAAAGCTGAACAAACAGGGGAAAGGCGAAGTAAACCGTTCCGACATCGGGCCTGATGATTTGAAGAAGCTGTATCTCTGTGATGTGCTCTCGCCATTCAGCGCCGATGGTCTTCAACGAAAAGTGTTTTTCGACCTTCTCATGTACTTACCAGGAAAGCGTAACCGGAGCAATGTGAGAGAACAAACTCGGGACACTTTTCTCATCGGATATAACTCAAGCACTGGTTTGAAATACATTTATCCGAACCCCTCGCACTGTGAAAACGTTTTTGCCGAAGGAAAATGCCCGCGGATGTACGAAAAACCAGGAAATCCAAGATGTCCTGTTGCTTCATTTCTCAAGTACCTTTCTAAACTGAATCCCATGAATCTGTACCTGTGGCAGAGACCCAAAGCTTCCTTCAAACACCATGCTTGTGAAGATGATCCCATCTGGTATGAAAACGCAGCAGTTGGTCACAATTCACTGGGAGAGATGATGACTAACATGTCTAAACTTGCACGTCTGTCCAGGATTTATACCAACAACTGCATTAGAGGCACATACGTGGCAATTCTTGACAGCCTTGTGGACGATTATCCACTCATTACTACTCTAGTATCTCAGCCAGCTCCCCAGAGATATCAACCCATCCTCCCTCGAGAGCCTTGCGACGAGCGTCCTACCATGGTGTCAGTTAACGGAAAGTATCGGGCATCAAGTCCAGAGGAAACAGTAACCTCAAGATGCAGTGACATCCAACTAGGCTCATCGGCATTCAGCGCAGTTCAGAGCAGAGAACAAGCTCATCTCACAAAGATCATTATTAATTCAAGCCATTCTCAGTCTCAGGCTTTAAATCTAAGCAGCATCAGAACCTCTTCTTCACAAGGGAACAACCATGCCTTCAGTGAGAAGCAAACAGAGCTAAAGCCATCAAGTCCAACAGAATTCTCTTTGCTTGGAATGCAATACTATTCTAGCCAGAGGGGACTACAGTCACCCCTTGCAGCCTACAGGTTAAGTCAGCTTCAAGCACCTCCAAATAATTTACGCAGTCCGCTTCAATCATCATTTAAAACTACTGATGGTAATTACAGCTTGCCTCATACATCATCAGCAGGCCGTGCCGGAATGAACTATCCAGGGCACACCAGTTCAAGAGTTGTTTATTGTCAAACAGCACCAACCATGGCTTCTTCTTCATCCCACCCCATGGTAAGCTCAAGCAAAGATGATAGGTTTGATTTCTCACAAAATTCACTGAGTCGAGGACACAGTGCCGCTGATAAAAGCTCAATGCCTGGAAGCCCCCTCACTACTCATGTACTGGACACAGCACGTGGTATACCAGCCAGGAACCTGCAGATACAGCTGTACTTTGAAGAAATGCGACCTGACAGTCGCATGTGGAAACATATCACATCAGGAGTCACCAATGTTGATGGTAGAATTCCTGACCTACTGACTCAAGAGCAGTTTATACCTGGTAAATACATGATCAGATTTGAGACTGAAGCTTATTTCAAGGAGACTGGAGTTTCTTCATTCTTTTACCCCTATGTTGAGATTGTATTTCTCATCAGTGATCCATCTCAACACTACCATGTACCACTCCTGATCAGTCCATTCTCCTACTCCACATACCGTGGTAGCTAA

Transcript

ANN22301-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q06S87	5-hydroxyisourate hydrolase OS=Danio rerio OX=7955 GN=urah PE=1 SV=1
Q9CRB3	5-hydroxyisourate hydrolase OS=Mus musculus OX=10090 GN=Urah PE=1 SV=1
Q21882	Probable 5-hydroxyisourate hydrolase R09H10.3 OS=Caenorhabditis elegans OX=6239 GN=R09H10.3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008298 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00576 all species →	Transthyretin	HIUase/Transthyretin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023418 all species →	Binding_site	Transthyretin, thyroxine binding site	Interproscan
IPR014306 all species →	Family	Hydroxyisourate hydrolase	Interproscan
IPR052787 all species →	Family	Mitochondrial antiviral-signaling domain-containing protein	Interproscan
IPR023416 all species →	Domain	Transthyretin/hydroxyisourate hydrolase domain	Interproscan
IPR023419 all species →	Conserved_site	Transthyretin, conserved site	Interproscan
IPR036817 all species →	Homologous_superfamily	Transthyretin/hydroxyisourate hydrolase domain superfamily	Interproscan
IPR000895 all species →	Family	Transthyretin/hydroxyisourate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21446 all species →	DUF3504 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006144 all species →	Biological Process	purine nucleobase metabolic process	Interproscan
GO:0033971 all species →	Molecular Function	hydroxyisourate hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN22301-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.