Detailed information of ANN22302-RA in Montipora grisea

Genomic Location: Scaffold_27__1_contigs__length_2138198:29711...31986
NR annotation: WP_166988330.1, serine hydroxymethyltransferase [Pseudomaricurvus alkylphenolicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q21NP8Serine hydroxymethyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=glyA PE=3 SV=1
C5BS91Serine hydroxymethyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=glyA PE=3 SV=1
B3PBD6Serine hydroxymethyltransferase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=glyA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan
PF14833NAD_binding_11NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenaseDomainInterproscan
PF03446NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002204Conserved_site3-hydroxyisobutyrate dehydrogenase-related, conserved siteInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan
IPR029154Domain3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domainInterproscan
IPR001085FamilySerine hydroxymethyltransferaseInterproscan
IPR013328Homologous_superfamily6-phosphogluconate dehydrogenase, domain 2Interproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR011548Family3-hydroxyisobutyrate dehydrogenaseInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR019798Binding_siteSerine hydroxymethyltransferase, pyridoxal phosphate binding siteInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR006115Domain6-phosphogluconate dehydrogenase, NADP-bindingInterproscan
IPR008927Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan
GO:0008442Molecular Function3-hydroxyisobutyrate dehydrogenase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070905Molecular Functionserine bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15016K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenaseEC:4.2.1.17
EC:1.1.1.35
Carbon fixation pathways in prokaryotesko00720deepkoala

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