Gene detail

Detailed information of ANN22304-RA in Montipora grisea

Genomic Location: Scaffold_27__1_contigs__length_2138198:96594...97718
NR annotation: HCE2178903.1, GDP-mannose 4,6-dehydratase [Vibrio parahaemolyticus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q56872	GDP-mannose 4,6-dehydratase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=gmd PE=3 SV=2
Q56598	GDP-mannose 4,6-dehydratase OS=Vibrio cholerae OX=666 GN=gmd PE=3 SV=2
P0AC90	GDP-mannose 4,6-dehydratase OS=Escherichia coli O157:H7 OX=83334 GN=gmd PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16363	GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016040	Domain	NAD(P)-binding domain	Interproscan
IPR006368	Family	GDP-mannose 4,6-dehydratase	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43715	GDP-MANNOSE 4,6-DEHYDRATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008446	Molecular Function	GDP-mannose 4,6-dehydratase activity	Interproscan
GO:0019673	Biological Process	GDP-mannose metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01711	gmd, GMDS; GDPmannose 4,6-dehydratase	EC:4.2.1.47	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala