Gene detail

Detailed information of ANN22353-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:2001984...2012594
NR annotation: XP_044176434.1, uncharacterized protein LOC114955339 isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00554	RHD_DNA_bind	Rel homology DNA-binding domain	Domain	Interproscan
PF16179	RHD_dimer	Rel homology dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR008366	Family	Nuclear factor of activated T cells (NFAT)	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR037059	Homologous_superfamily	Rel homology domain (RHD), DNA-binding domain superfamily	Interproscan
IPR011539	Domain	Rel homology domain, DNA-binding domain	Interproscan
IPR002909	Domain	IPT domain	Interproscan
IPR032397	Domain	Rel homology dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12533	NFAT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17335	NFAT5; nuclear factor of activated T-cells 5	-	Transcription factors	ko03000	deepkoala