Gene detail

Detailed information of ANN22366-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:2215324...2241469
NR annotation: CAH3126837.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN22366-RA

ATGTGTTATCTACTCATTAAATTAGTGGACAAAAGCAGCAGAATTCAGCCTTCTCCAACTTTAAGGGCCAATGGAAATGCCTCCACCGTATCTCTTGTTTCCACGCCATCCGGGAATTTCACCATCAATTCTTCCATGCCATCCGGGAATATGAGCACTGCGGAGCCACTCAGGCCCTCCTCGGTCGTTCCTATCCAATCCTCCTCTGTCCAGAATAATCTGATGCCGCTGGTGCCATCTGGAGAAGACATTGACCAGGAGTTTGGATCTCTGGTTGAAGAGCTTGGCGTCAAGTTTTCTAAGGAAATCGACCCAAAGAATTCAAGACCGAGCGACGTAAAAGTTGTCAAGACCCTGATACAAATGATGGGGAAAGCCGTGGCTCTCTTGGTAAAATACAACGAGTCGGGAAATGCTACTATCGACTACTTTAACAACACTGATAGCCTTGTGTTGATACTAAAGAAGTTCGACTGTCTTGGAGAGAGAGCAGATATCCCTGACCGCTCTAACAAAACCACACGGGAAGATTTGGAAAAGGTCACAGATTATGTGACACTGAAATTTGACTGTCCAAGAATCGTGATTAACGAAACTCGTCCAGAAAATCCCAGGTCAAGAAAAAGACGGGACGTTGAAGTCGAAGTTACCATGGAGATAGACGCTGACGAAGATAGAGGAGATTTCCACGAGTTCCAGTTACTTCACCATCACTCGAGGTTCAGAAGAAGTGCCGCTGAACCGCAACAGTGCGGGCCACTAAAGTGCAATGTTAAAAGATTTGAAACCACTATAATAATCACAAACAGAATCTACAACGAATCTCTTAAAAACCATTCCCTGGAATACTACAAAAGTTTGACCGACGAGTTTACAGCTATGCTGAAACGCGTGCTCGAATCCTACCTCAAAGTGGACAAGATTCACACTTTCGACTATTTTAAAAGACCCGTTGGGGAAGATGGTGTTGAGGCCCAATTCTACCTCGATGTCCACGGTCCAGACATCACCCAACATAACGTGACCAGCATTTTAAAGAGTGTGGCCGCAAATAACATTCTTGGGCAGTTTGAAGTGGAAAAAGATAAAATTAAATCCGAACATAAAGAAGTTGTTGATGGCAATTACACACAGTGGGGTCAGTGGAATCCTTGTGACAGCAAGTTTGATACGAAAAGACAGCGGACTTGTGAGGGCCATAAGAATGGAGGACAGTGTTATGGCGCCGCTCAAGAGACTCGGAAGTGTGATTGCGTGTTTCACAAGACAAGCGGTGGAAACATCACCTCCCCGCTGTTTCCAAACAATTACCCTGAAGGTGTGCATTGTGTGTGGGTGCTGACGGCTCCAGTAAATCACACCGTGAAGCTACTCTTGAAGGAATTTTCTTTGGAACAGGACAAGAAGTGCTTCTATGATTACATGGAATTTTACGATGGAAACGCAACAGATGAACAACGAATGATTACCAACCGGATGTGTGGGAGCCATGGCCCGCTCACTTTTGAGTCATCAGGGCAGATGTTGTCGGTTGTGTTCAATTCAGATAAGAGCGAAACGTTCAAAGGCTTCCGAGCTGAGTGGCATACAGAGCAAAGAAAGGAAAAAGTGATTAAGTATGTTCCACAATACGTTACCGCTCTGACAATGGTTTACAGTCCAAATGTGAACGGCACGCATTACCCGCTGGGAACTGCAACCACGTGTACTTCGGACAGAAAAACCATTGACCAAGAATGCATCTTTAAAGAGCAAGTGTTTGTCATCTCTCGGTTAATAAGTACTCATATGGACCGTGATCTTTCGATACTTCATGGAAACAAAATTGTTATCACCTTTGAACACGTTATGCTTGTTATTCATGAGCCCGGTCCCCCGGTAGTGCTCCTCAACAGTGGACTGGCAGTACACGTCCGGTTAAGGTGCAACCTCGTTCCCAGGGCATCTCCTCCTGGGAGCGAGAACGAGAAACTGTTCCCAGCGATTTACAACGGTCAGAAGTACTGCGTGCGCTGGAATGAGAAAGCCAAGAGAGAACAGCCAAATGACGACACTGAGCTGCTTCAGACTACTGGCGCCTGGACAAGGCGAGGCTGCTCTGTTATATCAACTAACATAACACACACGTCTTGCGCCTGTGATCACCAAGGTCTTTTTGCTGTGATTGCACAAGAAAAGGTTGACTCCAGCAAACTCAAACTGTTGGCGAACACTTACATTGGAATGGGGATTTCATATTTTATTCTCATCTTGGCCATTGCGCACATTGTCTGGAAAATTGAAATCCACGGAGGAGAAGTCATGCGCATTAACATGTGTGCTGCCATTATTGTGATGCAGTCAGTCTTTCTCATTGGTGCGCATGTTGAAGCTCAACAGACCCTGTGTAGTTTTCTTGCATTCGCCGTTTATTTCTCCGTTCTGGCAGAATTTTGCTGGCTTCTGCTCCACGGACTGAGAATCCATGGCAAAATCAAGAAGATCTTCGCTTCAAACCTCAATATCGAGATTGTTTATGTCGTCATTGGATGGGGTCCATTCCTCATCATTTCCATTCATCTGGCATTCACTCCTTCCCTCCTTCTTCGAAACCAGAGACAGTATATCAGACAGCCTCATATTCACTCCTTGGTACCCATTGTTCGTGCAGGATTGCCAATGCTTCTGGCTCTTATCGCTATCGGGGTACAGATTGATCCGAAGAGCCCAGACGATGTGTGTTGGGAGGCAGCAGCTGGTAGTGCGATGTGGGGATATGCTGGACCTGTCATCATCATCGCCTTGCTTAATGCGGCTGTCTTGATAAAGCTTCTCATTCCAACCCAGGATGTGAAAGACGGCTACGATTACGAAGAAATGAGGTTTCGCGTGCTCAAGGACTTCGTTTTCCTGTTATTTTTCGGGTTGACCTGCACATTCGCTTATCAAGCTGTGGAGGAAGAAAGGTTCTTTGAACAATATCTGCTCTCAGCTTTTGTCATTATGCAGGCTCTGGCCATGTTTGTCTTTGGAAGAGAGGGTCGAAAAGACTTCATCAAGCGTGAGGAGCAGCCAAAACCGGAACCCGCCAACGAGGAACCAGTGGAAGAGAATGTTTATGAAAGCATTGAACAGGAAACGAATCCTAAGGAGTCGGACCTAGGAGATGGACCCGTGAGGAGACCCCGGAAGAGGGCATCTAACAAGCCTCCCGAGAAGATTACAGTCACCACGTTGAAAAACCTCAACATCTACAAGGAAGGTGGCCAATACGTCATCGAGGCTTGA

Transcript

ANN22366-RA

Protein

Uniprot

Uniprot term	Description
Q2Q421	Adhesion G protein-coupled receptor E2 OS=Canis lupus familiaris OX=9615 GN=ADGRE2 PE=2 SV=2
Q5VXM1	CUB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CDCP2 PE=2 SV=2
Q8BQH6	CUB domain-containing protein 2 OS=Mus musculus OX=10090 GN=Cdcp2 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04974	TRPV5; transient receptor potential cation channel subfamily V member 5	-	Ion channels	ko04040	deepkoala