Detailed information of ANN22367-RA in Nanomia septata

Genomic Location: chr8:133004519...133005973
NR annotation: XP_002163442.1, nucleoporin p58/p45 [Hydra vulgaris]
Species abbreviation NSEPT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005242 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15967
all species →		Nucleoporin_FG2Nucleoporin FG repeated regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024882
all species →		FamilyNucleoporin p58/p45/NUP49Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13437
all species →		NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0006913
all species →		Biological Processnucleocytoplasmic transportInterproscan
GO:0008139
all species →		Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14307NUPL1, NUP49; nucleoporin p58/p45-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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