Genomic Location: Scaffold_23__1_contigs__length_2932364:335398...338094
NR annotation: MCE2401213.1, methionyl-tRNA formyltransferase [Candidatus Poribacteria bacterium]
| CDS | ||||
| ANN22504-RA | ||||
| Transcript |
| ANN22504-RA |
| Protein |
| ANN22504-RA |
| Uniprot term | Description |
|---|---|
| A3DCX5 | Methionyl-tRNA formyltransferase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=fmt PE=3 SV=1 |
| Q8R9T1 | Methionyl-tRNA formyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=fmt PE=3 SV=1 |
| Q2LRX4 | Methionyl-tRNA formyltransferase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=fmt PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03793 | PASTA | PASTA domain | Domain | Interproscan |
| PF00551 | Formyl_trans_N | Formyl transferase | Domain | Interproscan |
| PF02911 | Formyl_trans_C | Formyl transferase, C-terminal domain | Domain | Interproscan |
| PF00834 | Ribul_P_3_epim | Ribulose-phosphate 3 epimerase family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR041711 | Domain | Methionyl-tRNA formyltransferase, N-terminal domain | Interproscan |
| IPR000056 | Family | Ribulose-phosphate 3-epimerase-like | Interproscan |
| IPR005543 | Domain | PASTA domain | Interproscan |
| IPR011060 | Homologous_superfamily | Ribulose-phosphate binding barrel | Interproscan |
| IPR011034 | Homologous_superfamily | Formyl transferase-like, C-terminal domain superfamily | Interproscan |
| IPR044135 | Domain | Methionyl-tRNA formyltransferase, C-terminal domain | Interproscan |
| IPR005794 | Family | Methionyl-tRNA formyltransferase | Interproscan |
| IPR036477 | Homologous_superfamily | Formyl transferase, N-terminal domain superfamily | Interproscan |
| IPR026019 | Family | Ribulose-phosphate 3-epimerase | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR002376 | Domain | Formyl transferase, N-terminal | Interproscan |
| IPR005793 | Domain | Formyl transferase, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11138 | METHIONYL-TRNA FORMYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004479 | Molecular Function | methionyl-tRNA formyltransferase activity | Interproscan |
| GO:0005975 | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0016857 | Molecular Function | racemase and epimerase activity, acting on carbohydrates and derivatives | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0071951 | Biological Process | conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | Interproscan |
| GO:0009058 | Biological Process | biosynthetic process | Interproscan |
| GO:0004750 | Molecular Function | D-ribulose-phosphate 3-epimerase activity | Interproscan |
| GO:0006098 | Biological Process | pentose-phosphate shunt | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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