Detailed information of ANN22512-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:5230654...5234774
NR annotation: CAH3184990.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3UY23Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus OX=10090 GN=Fdxacb1 PE=2 SV=2
Q94K73Phenylalanine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g58140 PE=1 SV=1
P0C8L4Uncharacterized protein At4g26485 OS=Arabidopsis thaliana OX=3702 GN=At4g26485 PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003851 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10354
all species →		BMT5-likerRNA (uridine-N3-)-methyltransferase BTM5-likeDomainInterproscan
PF03147
all species →		FDX-ACBFerredoxin-fold anticodon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005121
all species →		DomainFerrodoxin-fold anticodon-binding domainInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR036690
all species →		Homologous_superfamilyFerrodoxin-fold anticodon-binding domain superfamilyInterproscan
IPR019446
all species →		Domain25S rRNA (uridine-N(3))-methyltransferase BMT5-likeInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11538
all species →		PHENYLALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0070042
all species →		Molecular FunctionrRNA (uridine-N3-)-methyltransferase activityInterproscan
GO:0070475
all species →		Biological ProcessrRNA base methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN22512-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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