Gene detail

Detailed information of ANN22582-RA in Montipora grisea

Genomic Location: Scaffold_23__1_contigs__length_2932364:1940456...1941391
NR annotation: RKU12604.1, tryptophan--tRNA ligase [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9HVX6	Tryptophan--tRNA ligase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=trpS PE=3 SV=1
Q87WW4	Tryptophan--tRNA ligase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=trpS PE=3 SV=1
Q7WGI7	Tryptophan--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=trpS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR002306	Family	Tryptophan-tRNA ligase	Interproscan
IPR002305	Family	Aminoacyl-tRNA synthetase, class Ic	Interproscan
IPR050203	Family	Tryptophan--tRNA ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43766	TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004830	Molecular Function	tryptophan-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006436	Biological Process	tryptophanyl-tRNA aminoacylation	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01867	WARS, trpS; tryptophanyl-tRNA synthetase	EC:6.1.1.2	Transfer RNA biogenesis	ko03016	deepkoala