Genomic Location: Scaffold_1__1_contigs__length_42512999:6812126...6832061
NR annotation: XP_020625778.1, inner nuclear membrane protein Man1-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families
| CDS |
| ANN22601-RA |
| Transcript |
| ANN22601-RA |
| Protein |
| ANN22601-RA |
| UniProt accession | Description |
|---|---|
| Q9Y2U8 | Inner nuclear membrane protein Man1 OS=Homo sapiens OX=9606 GN=LEMD3 PE=1 SV=2 |
| P11369 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004662 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03020 all species → | LEM | LEM domain | Domain | Interproscan |
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF20049 all species → | DUF6451 | Domain of unknown function (DUF6451) | Domain | Interproscan |
| PF09402 all species → | MSC | Man1-Src1p-C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003887 all species → | Domain | LEM domain | Interproscan |
| IPR011015 all species → | Homologous_superfamily | LEM/LEM-like domain superfamily | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR045609 all species → | Domain | Domain of unknown function DUF6451 | Interproscan |
| IPR018996 all species → | Domain | Man1/Src1-like, C-terminal | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR041885 all species → | Homologous_superfamily | MAN1, winged-helix domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47027 all species → | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
ANN22601-RA. This gene does have a gene model — the search simply returned no hit.ANN22601-RA.
