Detailed information of ANN22610-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:7094947...7108431
NR annotation: XP_020612083.1, isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P41565Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3g PE=1 SV=2
P70404Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Mus musculus OX=10090 GN=Idh3g PE=1 SV=1
P51553Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo sapiens OX=9606 GN=IDH3G PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001155 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00180
all species →		Iso_dhIsocitrate/isopropylmalate dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019818
all species →		Conserved_siteIsocitrate/isopropylmalate dehydrogenase, conserved siteInterproscan
IPR024084
all species →		DomainIsopropylmalate dehydrogenase-like domainInterproscan
IPR004434
all species →		FamilyIsocitrate dehydrogenase NAD-dependentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11835
all species →		DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000287
all species →		Molecular Functionmagnesium ion bindingInterproscan
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287
all species →		Molecular FunctionNAD bindingInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006099
all species →		Biological Processtricarboxylic acid cycleInterproscan
GO:0006102
all species →		Biological Processisocitrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00030IDH3; isocitrate dehydrogenase (NAD+)EC:1.1.1.41
Citrate cycle (TCA cycle)ko00020deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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