Detailed information of ANN22686-RA in Montipora grisea

Genomic Location: Scaffold_22__1_contigs__length_3165292:558475...560642
NR annotation: MCG9134422.1, leucine-rich repeat domain-containing protein [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0014682 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13860
all species →		FlgD_igFlgD Ig-like domainDomainInterproscan
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR008965
all species →		Homologous_superfamilyCBM2/CBM3, carbohydrate-binding domain superfamilyInterproscan
IPR025965
all species →		DomainFlgD/Vpr, Ig-like domainInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR026444
all species →		DomainSecretion system C-terminal sorting domainInterproscan
IPR020472
all species →		RepeatG-protein beta WD-40 repeatInterproscan
IPR036439
all species →		Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22847
all species →		WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan
GO:0000272
all species →		Biological Processpolysaccharide catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN22686-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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