Genomic Location: chr8:152294855...152305079
NR annotation: XP_047133206.1, nuclear exosome regulator NRDE2 isoform X1 [Hydra vulgaris]
| CDS |
| ANN22721-RA |
| Transcript |
| ANN22721-RA |
| Protein |
| ANN22721-RA |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08424 | NRDE-2 | NRDE-2, necessary for RNA interference | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013633 | Family | siRNA-mediated silencing protein NRDE-2 | Interproscan |
| IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13471 | TETRATRICOPEPTIDE-LIKE HELICAL | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0031048 | Biological Process | regulatory ncRNA-mediated heterochromatin formation | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:1902369 | Biological Process | negative regulation of RNA catabolic process | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K26109 | NRDE2; nuclear exosome regulator NRDE2 | - | Messenger RNA biogenesis | ko03019 | deepkoala |
