Detailed information of ANN22907-RA in Montipora grisea

Genomic Location: Scaffold_21__1_contigs__length_3404173:1493704...1496235
NR annotation: MXX25795.1, DNA helicase RecQ [Caldilineaceae bacterium SB0668_bin_21]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P15043ATP-dependent DNA helicase RecQ OS=Escherichia coli (strain K12) OX=83333 GN=recQ PE=1 SV=5
P40724ATP-dependent DNA helicase RecQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=recQ PE=3 SV=3
Q9CL21ATP-dependent DNA helicase RecQ OS=Pasteurella multocida (strain Pm70) OX=272843 GN=recQ PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan
PF14493HTH_40Helix-turn-helix domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00570HRDCHRDC domainDomainInterproscan
PF09382RQCRQC domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR029491DomainHelicase Helix-turn-helix domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002121DomainHRDC domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR044876Homologous_superfamilyHRDC domain superfamilyInterproscan
IPR018982DomainRQC domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR006293FamilyDNA helicase, ATP-dependent, RecQ type, bacterialInterproscan
IPR004589FamilyDNA helicase, ATP-dependent, RecQ typeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0009432Biological ProcessSOS responseInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0030894Cellular ComponentreplisomeInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043590Cellular Componentbacterial nucleoidInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03654recQ; ATP-dependent DNA helicase RecQEC:5.6.2.4
DNA repair and recombination proteinsko03400deepkoala

TOP