Gene detail

Detailed information of ANN22966-RA in Montipora grisea

Genomic Location: Scaffold_21__1_contigs__length_3404173:2396552...2397484
NR annotation: MXX25873.1, peptide chain release factor 2 [Caldilineaceae bacterium SB0668_bin_21]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B9L0E3	Peptide chain release factor 2 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) OX=309801 GN=prfB PE=3 SV=1
B8G607	Peptide chain release factor 2 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX=326427 GN=prfB PE=3 SV=1
A5IM04	Peptide chain release factor 2 OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=prfB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002637 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03462 all species →	PCRF	PCRF domain	Domain	Interproscan
PF00472 all species →	RF-1	RF-1 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004374 all species →	Family	Peptide chain release factor 2	Interproscan
IPR045853 all species →	Homologous_superfamily	Peptide chain release factor class I superfamily	Interproscan
IPR005139 all species →	Domain	Peptide chain release factor	Interproscan
IPR000352 all species →	Domain	Peptide chain release factor class I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43116 all species →	PEPTIDE CHAIN RELEASE FACTOR 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006415 all species →	Biological Process	translational termination	Interproscan
GO:0016149 all species →	Molecular Function	translation release factor activity, codon specific	Interproscan
GO:0003747 all species →	Molecular Function	translation release factor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02836	prfB; peptide chain release factor 2	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.