Gene detail

Detailed information of ANN22979-RA in Montipora grisea

Genomic Location: Scaffold_21__1_contigs__length_3404173:2590124...2590975
NR annotation: MXZ23079.1, ABC transporter permease [Caldilineaceae bacterium SB0665_bin_25]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P42062	Oligopeptide transport system permease protein AppB OS=Bacillus subtilis (strain 168) OX=224308 GN=appB PE=3 SV=2
Q8FWN8	Putative peptide permease protein BRA0408/BS1330_II0405 OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=BRA0408 PE=3 SV=1
A5VU90	Putative peptide permease protein BOV_A0351 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=BOV_A0351 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0017070 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00528 all species →	BPD_transp_1	Binding-protein-dependent transport system inner membrane component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035906 all species →	Homologous_superfamily	MetI-like superfamily	Interproscan
IPR000515 all species →	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43163 all species →	DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02033	ABC.PE.P; peptide/nickel transport system permease protein	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.