Gene detail

Detailed information of ANN22991-RA in Montipora grisea

Genomic Location: Scaffold_21__1_contigs__length_3404173:2803975...2805057
NR annotation: MYH63766.1, histone deacetylase [Caldilineaceae bacterium SB0675_bin_29]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O30107	Probable deacetylase AF_0130 OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=AF_0130 PE=3 SV=1
Q2QWU2	Histone deacetylase 10, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HDAC10 PE=1 SV=1
Q941D6	Histone deacetylase 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HDA14 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00850	Hist_deacetyl	Histone deacetylase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050284	Family	Histone deacetylase and polyamine deacetylase	Interproscan
IPR000286	Family	Histone deacetylase family	Interproscan
IPR037138	Homologous_superfamily	Histone deacetylase domain superfamily	Interproscan
IPR023801	Domain	Histone deacetylase domain	Interproscan
IPR023696	Homologous_superfamily	Ureohydrolase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10625	HISTONE DEACETYLASE HDAC1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000118	Cellular Component	histone deacetylase complex	Interproscan
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0004407	Molecular Function	histone deacetylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0016575	Biological Process	obsolete histone deacetylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04768	acuC; acetoin utilization protein AcuC	-	Carbohydrate metabolism	-	deepkoala