Detailed information of ANN23024-RA in Montipora grisea

Genomic Location: Scaffold_21__1_contigs__length_3404173:3101933...3103233
NR annotation: MYC94060.1, tRNA pseudouridine(38-40) synthase TruA [Caldilineaceae bacterium SB0661_bin_32]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7NR34tRNA pseudouridine synthase A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=383372 GN=truA PE=3 SV=1
A5USG0tRNA pseudouridine synthase A OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=truA PE=3 SV=1
A8F526tRNA pseudouridine synthase A OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) OX=416591 GN=truA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01416PseudoU_synth_1tRNA pseudouridine synthaseDomainInterproscan
PF01196Ribosomal_L17Ribosomal protein L17FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020094Homologous_superfamilyPseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalInterproscan
IPR036373Homologous_superfamilyLarge ribosomal subunit protein bL17 superfamilyInterproscan
IPR001406FamilyPseudouridine synthase I, TruAInterproscan
IPR047859Conserved_siteLarge ribosomal subunit protein bL17, conserved siteInterproscan
IPR020097DomainPseudouridine synthase I, TruA, alpha/beta domainInterproscan
IPR020095Homologous_superfamilyPseudouridine synthase I, TruA, C-terminalInterproscan
IPR000456FamilyLarge ribosomal subunit protein bL17Interproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11142PSEUDOURIDYLATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0031119Biological ProcesstRNA pseudouridine synthesisInterproscan

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