Detailed information of ANN23097-RA in Montipora grisea

Genomic Location: Scaffold_26__1_contigs__length_2154940:658484...659885
NR annotation: MCE2402322.1, sigma-54-dependent Fis family transcriptional regulator [Candidatus Poribacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P27713Nif-specific regulatory protein OS=Herbaspirillum seropedicae OX=964 GN=nifA PE=4 SV=1
P25852Transcriptional regulatory protein ZraR OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=zraR PE=1 SV=2
P14375Transcriptional regulatory protein ZraR OS=Escherichia coli (strain K12) OX=83333 GN=zraR PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02954HTH_8Bacterial regulatory protein, Fis familyDomainInterproscan
PF00158Sigma54_activatSigma-54 interaction domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002197DomainDNA binding HTH domain, Fis-typeInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR025944Conserved_siteSigma-54 interaction domain, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002078DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR025943Binding_siteSigma-54 interaction domain, ATP-binding site 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32071TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

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