Detailed information of ANN23121-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:16863242...16872421
NR annotation: KAJ7371261.1, chromatin-modulating protein mrc1 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000566 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR051004
all species →		FamilyDendritic cell-specific ICAM-grabbing non-integrin domain-containing proteinInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22802
all species →		C-TYPE LECTIN SUPERFAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009897
all species →		Cellular Componentexternal side of plasma membraneInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan
GO:0044419
all species →		Biological Processbiological process involved in interspecies interaction between organismsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN23121-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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