Detailed information of ANN23165-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:17603631...17607975
NR annotation: KAJ7371444.1, hypothetical protein OS493_025914 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80WM4Hyaluronan and proteoglycan link protein 4 OS=Mus musculus OX=10090 GN=Hapln4 PE=2 SV=2
Q86UW8Hyaluronan and proteoglycan link protein 4 OS=Homo sapiens OX=9606 GN=HAPLN4 PE=1 SV=1
Q90953Versican core protein OS=Gallus gallus OX=9031 GN=VCAN PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001789 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00024
all species →		PAN_1PAN domainDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF00193
all species →		XlinkExtracellular link domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000538
all species →		DomainLink domainInterproscan
IPR003609
all species →		DomainPAN/Apple domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR043210
all species →		FamilyCD44 antigen-likeInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10225
all species →		HYALURONAN RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005540
all species →		Molecular Functionhyaluronic acid bindingInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN23165-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP