Detailed information of ANN23171-RA in Montipora grisea

Genomic Location: Scaffold_26__1_contigs__length_2154940:2113540...2115508
NR annotation: MCE2402822.1, YjhG/YagF family D-xylonate dehydratase [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P77596D-xylonate dehydratase YagF OS=Escherichia coli (strain K12) OX=83333 GN=yagF PE=1 SV=1
P39358D-xylonate dehydratase YjhG OS=Escherichia coli (strain K12) OX=83333 GN=yjhG PE=1 SV=2
A8LKN5Dihydroxy-acid dehydratase OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) OX=398580 GN=ilvD PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0030859 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00920
all species →		ILVD_EDDDehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020558
all species →		Conserved_siteDihydroxy-acid/6-phosphogluconate dehydratase, conserved siteInterproscan
IPR042096
all species →		Homologous_superfamilyDihydroxy-acid dehydratase, C-terminalInterproscan
IPR000581
all species →		FamilyDihydroxy-acid/6-phosphogluconate dehydrataseInterproscan
IPR017798
all species →		FamilyD-xylonate dehydratase YjhG/YagFInterproscan
IPR037237
all species →		Homologous_superfamilyIlvD/EDD, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43661
all species →		D-XYLONATE DEHYDRATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0016836
all species →		Molecular Functionhydro-lyase activityInterproscan
GO:0050401
all species →		Molecular Functionxylonate dehydratase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22396yjhG, yagF; xylonate dehydrataseEC:4.2.1.82
Pentose and glucuronate interconversionsko00040deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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