Detailed information of ANN23176-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:17824899...17835537
NR annotation: CAH3115389.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5PQ04m7GpppN-mRNA hydrolase NUDT17 OS=Xenopus laevis OX=8355 GN=nudt17 PE=2 SV=1
Q4V8V2m7GpppN-mRNA hydrolase NUDT17 OS=Danio rerio OX=7955 GN=nudt17 PE=2 SV=1
Q5M8V2m7GpppN-mRNA hydrolase NUDT17 OS=Xenopus tropicalis OX=8364 GN=nudt17 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007176 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00293
all species →		NUDIXNUDIX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020476
all species →		DomainNUDIX hydrolaseInterproscan
IPR050241
all species →		FamilyNAD-capped RNA hydrolase NudC subfamilyInterproscan
IPR000086
all species →		DomainNUDIX hydrolase domainInterproscan
IPR020084
all species →		Conserved_siteNUDIX hydrolase, conserved siteInterproscan
IPR015797
all species →		Homologous_superfamilyNUDIX hydrolase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42904
all species →		NUDIX HYDROLASE, NUDC SUBFAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005777
all species →		Cellular ComponentperoxisomeInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006734
all species →		Biological ProcessNADH metabolic processInterproscan
GO:0006742
all species →		Biological ProcessNADP catabolic processInterproscan
GO:0019677
all species →		Biological ProcessNAD catabolic processInterproscan
GO:0035529
all species →		Molecular FunctionNADH pyrophosphatase activityInterproscan
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN23176-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP