Gene detail

Detailed information of ANN23208-RA in Montipora grisea

Genomic Location: Scaffold_29__1_contigs__length_1564183:425202...426173
NR annotation: WP_166991032.1, octaprenyl diphosphate synthase [Pseudomaricurvus alkylphenolicus]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0AD57	Octaprenyl diphosphate synthase OS=Escherichia coli (strain K12) OX=83333 GN=ispB PE=1 SV=1
P0AD58	Octaprenyl diphosphate synthase OS=Shigella flexneri OX=623 GN=ispB PE=3 SV=1
P44916	Octaprenyl diphosphate synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=ispB PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003928 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00348 all species →	polyprenyl_synt	Polyprenyl synthetase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000092 all species →	Family	Polyprenyl synthetase	Interproscan
IPR008949 all species →	Homologous_superfamily	Isoprenoid synthase domain superfamily	Interproscan
IPR033749 all species →	Conserved_site	Polyprenyl synthetase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12001 all species →	GERANYLGERANYL PYROPHOSPHATE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008299 all species →	Biological Process	isoprenoid biosynthetic process	Interproscan
GO:0004659 all species →	Molecular Function	prenyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02523	ispB; octaprenyl-diphosphate synthase	EC:2.5.1.90	Prenyltransferases	ko01006	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.