Detailed information of ANN23230-RA in Montipora grisea

Genomic Location: Scaffold_29__1_contigs__length_1564183:760560...762236
NR annotation: MBR9884198.1, GAF domain-containing protein [Oceanospirillales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P12627Nitrogen fixation protein VnfA OS=Azotobacter vinelandii OX=354 GN=vnfA PE=1 SV=1
P12626Nitrogen fixation protein AnfA OS=Azotobacter vinelandii OX=354 GN=anfA PE=4 SV=1
P09570Nif-specific regulatory protein OS=Azotobacter vinelandii OX=354 GN=nifA PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01590GAFGAF domainDomainInterproscan
PF00158Sigma54_activatSigma-54 interaction domainDomainInterproscan
PF02954HTH_8Bacterial regulatory protein, Fis familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003018DomainGAF domainInterproscan
IPR025944Conserved_siteSigma-54 interaction domain, conserved siteInterproscan
IPR002078DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002197DomainDNA binding HTH domain, Fis-typeInterproscan
IPR025943Binding_siteSigma-54 interaction domain, ATP-binding site 2Interproscan
IPR029016Homologous_superfamilyGAF-like domain superfamilyInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32071TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

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