Gene detail

Detailed information of ANN23240-RA in Montipora grisea

Genomic Location: Scaffold_29__1_contigs__length_1564183:889378...890746
NR annotation: RFP93334.1, 3-oxoacid CoA-transferase subunit B [Pseudomonas fluorescens]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54JD9	Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=oxct1 PE=3 SV=1
Q29551	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Sus scrofa OX=9823 GN=OXCT1 PE=1 SV=2
Q9W058	Succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Scot PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002898 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01144 all species →	CoA_trans	Coenzyme A transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012792 all species →	Domain	3-oxoacid CoA-transferase, subunit A	Interproscan
IPR037171 all species →	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan
IPR004165 all species →	Family	Coenzyme A transferase family I	Interproscan
IPR004163 all species →	Binding_site	Coenzyme A transferase binding site	Interproscan
IPR004164 all species →	Active_site	Coenzyme A transferase active site	Interproscan
IPR012791 all species →	Domain	3-oxoacid CoA-transferase, subunit B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13707 all species →	KETOACID-COENZYME A TRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008410 all species →	Molecular Function	CoA-transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01027	OXCT; 3-oxoacid CoA-transferase	EC:2.8.3.5	Valine, leucine and isoleucine degradation	ko00280	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.