Detailed information of ANN23253-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:19410433...19413317
NR annotation: CAB3985004.1, Enzymatic poly [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P27502Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) OX=10655 PE=1 SV=1
P07572Gag-Pro-Pol polyprotein OS=Mason-Pfizer monkey virus OX=11855 GN=gag-pro-pol PE=1 SV=2
P03364Gag-Pro-Pol polyprotein OS=Squirrel monkey retrovirus OX=11856 GN=pol PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00589Phage_integrasePhage integrase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010998Homologous_superfamilyIntegrase/recombinase, N-terminalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002104DomainIntegrase, catalytic domainInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35617PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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