Genomic Location: Scaffold_29__1_contigs__length_1564183:1187880...1190621
NR annotation: WP_166989212.1, DNA polymerase I [Pseudomaricurvus alkylphenolicus]
Species Montipora grisea · all data for this species · gene families
| CDS |
| ANN23273-RA |
| Transcript |
| ANN23273-RA |
| Protein |
| ANN23273-RA |
| UniProt accession | Description |
|---|---|
| Q9F173 | DNA polymerase I OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=polA PE=3 SV=2 |
| Q9HT80 | DNA polymerase I OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=polA PE=3 SV=1 |
| P00582 | DNA polymerase I OS=Escherichia coli (strain K12) OX=83333 GN=polA PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008336 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01367 all species → | 5_3_exonuc | 5'-3' exonuclease, C-terminal SAM fold | Domain | Interproscan |
| PF02739 all species → | 5_3_exonuc_N | 5'-3' exonuclease, N-terminal resolvase-like domain | Domain | Interproscan |
| PF01612 all species → | DNA_pol_A_exo1 | 3'-5' exonuclease | Domain | Interproscan |
| PF00476 all species → | DNA_pol_A | DNA polymerase family A | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR020045 all species → | Domain | DNA polymerase I-like, H3TH domain | Interproscan |
| IPR020046 all species → | Domain | 5'-3' exonuclease, alpha-helical arch, N-terminal | Interproscan |
| IPR019760 all species → | Conserved_site | DNA-directed DNA polymerase, family A, conserved site | Interproscan |
| IPR002421 all species → | Domain | 5'-3' exonuclease | Interproscan |
| IPR008918 all species → | Conserved_site | Helix-hairpin-helix motif, class 2 | Interproscan |
| IPR002562 all species → | Domain | 3'-5' exonuclease domain | Interproscan |
| IPR002298 all species → | Family | DNA polymerase A | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR029060 all species → | Homologous_superfamily | PIN-like domain superfamily | Interproscan |
| IPR001098 all species → | Domain | DNA-directed DNA polymerase, family A, palm domain | Interproscan |
| IPR018320 all species → | Family | DNA polymerase 1 | Interproscan |
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR036279 all species → | Homologous_superfamily | 5'-3' exonuclease, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10133 all species → | DNA POLYMERASE I | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0003887 all species → | Molecular Function | DNA-directed DNA polymerase activity | Interproscan |
| GO:0006260 all species → | Biological Process | DNA replication | Interproscan |
| GO:0008409 all species → | Molecular Function | 5'-3' exonuclease activity | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0006139 all species → | Biological Process | nucleobase-containing compound metabolic process | Interproscan |
| GO:0008408 all species → | Molecular Function | 3'-5' exonuclease activity | Interproscan |
| GO:0006261 all species → | Biological Process | DNA-templated DNA replication | Interproscan |
| GO:0006302 all species → | Biological Process | double-strand break repair | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02335 | polA; DNA polymerase I | EC:2.7.7.7 | DNA repair and recombination proteins | ko03400 | deepkoala |
