Gene detail

Detailed information of ANN23338-RA in Montipora grisea

Genomic Location: Scaffold_25__1_contigs__length_2167126:332830...334203
NR annotation: MYB58188.1, replicative DNA helicase [Gemmatimonadota bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9X4C9	Replicative DNA helicase DnaB OS=Geobacillus stearothermophilus OX=1422 GN=dnaB PE=1 SV=1
P37469	Replicative DNA helicase DnaC OS=Bacillus subtilis (strain 168) OX=224308 GN=dnaC PE=1 SV=2
Q8X5V3	Replicative DNA helicase DnaB OS=Escherichia coli O157:H7 OX=83334 GN=dnaB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012386 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00772 all species →	DnaB	DnaB-like helicase N terminal domain	Domain	Interproscan
PF03796 all species →	DnaB_C	DnaB-like helicase C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR016136 all species →	Homologous_superfamily	DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal	Interproscan
IPR007693 all species →	Domain	DNA helicase, DnaB-like, N-terminal	Interproscan
IPR007694 all species →	Domain	DNA helicase, DnaB-like, C-terminal	Interproscan
IPR036185 all species →	Homologous_superfamily	DNA helicase, DnaB-like, N-terminal domain superfamily	Interproscan
IPR007692 all species →	Family	DNA helicase, DnaB type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30153 all species →	REPLICATIVE DNA HELICASE DNAB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003678 all species →	Molecular Function	DNA helicase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006268 all species →	Biological Process	DNA unwinding involved in DNA replication	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02314	dnaB; replicative DNA helicase	EC:5.6.2.3	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.