Gene detail

Detailed information of ANN23340-RA in Montipora grisea

Genomic Location: Scaffold_25__1_contigs__length_2167126:339786...340919
NR annotation: MYD59737.1, elongation factor 4 [Gemmatimonadota bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3EE17	Elongation factor 4 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=lepA PE=3 SV=1
B3QPU3	Elongation factor 4 OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=lepA PE=3 SV=1
A1BHJ8	Elongation factor 4 OS=Chlorobium phaeobacteroides (strain DSM 266 / SMG 266 / 2430) OX=290317 GN=lepA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002510 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06421 all species →	LepA_C	GTP-binding protein LepA C-terminus	Family	Interproscan
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF14492 all species →	EFG_III	Elongation Factor G, domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR013842 all species →	Domain	GTP-binding protein LepA, C-terminal	Interproscan
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR006297 all species →	Family	Elongation factor 4	Interproscan
IPR038363 all species →	Homologous_superfamily	LepA, C-terminal domain superfamily	Interproscan
IPR041095 all species →	Domain	Elongation Factor G, domain II	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR035654 all species →	Domain	Elongation factor 4, domain IV	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43512 all species →	TRANSLATION FACTOR GUF1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0045727 all species →	Biological Process	positive regulation of translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN23340-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.