Detailed information of ANN23368-RA in Montipora grisea

Genomic Location: Scaffold_25__1_contigs__length_2167126:894258...896057
NR annotation: MCE2431443.1, RluA family pseudouridine synthase [Candidatus Latescibacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q45480Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus subtilis (strain 168) OX=224308 GN=ylyB PE=3 SV=3
P50513Ribosomal large subunit pseudouridine synthase D OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rluD PE=3 SV=2
O67638Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1758 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01479S4S4 domainDomainInterproscan
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan
PF01252Peptidase_A8Signal peptidase (SPase) IIFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR001872FamilyPeptidase A8, signal peptidase IIInterproscan
IPR037187Homologous_superfamilyDksA, N-terminal domain superfamilyInterproscan
IPR002942DomainRNA-binding S4 domainInterproscan
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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