Detailed information of ANN23416-RA in Montipora grisea

Genomic Location: Scaffold_25__1_contigs__length_2167126:1651088...1652433
NR annotation: MYF18284.1, PDZ domain-containing protein [Gemmatimonadota bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4XSC0Probable periplasmic serine endoprotease DegP-like OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=Pmen_1471 PE=3 SV=1
E1V4H2Probable periplasmic serine endoprotease DegP-like OS=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) OX=768066 GN=mucD PE=3 SV=1
B1J4D7Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas putida (strain W619) OX=390235 GN=PputW619_1070 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002592 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13365
all species →		Trypsin_2Trypsin-like peptidase domainDomainInterproscan
PF13180
all species →		PDZ_2PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR001478
all species →		DomainPDZ domainInterproscan
IPR009003
all species →		Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR051201
all species →		FamilyChloroplastic and Bacterial Serine ProteasesInterproscan
IPR001940
all species →		FamilyPeptidase S1CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43343
all species →		PEPTIDASE S12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0004252
all species →		Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN23416-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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