Detailed information of ANN23524-RA in Nanomia septata

Genomic Location: chr6:34050156...34052672
NR annotation: XP_047142101.1, pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RJT2pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 OS=Rattus norvegicus OX=10116 GN=Ftsj3 PE=1 SV=1
Q5ZKM1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 OS=Gallus gallus OX=9031 GN=FTSJ3 PE=2 SV=2
Q9DBE9pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 OS=Mus musculus OX=10090 GN=Ftsj3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07780Spb1_CSpb1 C-terminal domainDomainInterproscan
PF11861DUF3381Ribosomal RNA methyltransferase Spb1, DUF3381DomainInterproscan
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012920DomainRibosomal RNA methyltransferase, SPB1-like, C-terminalInterproscan
IPR015507FamilyRibosomal RNA large subunit methyltransferase EInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR028589FamilyAdoMet-dependent rRNA methyltransferase SPB1-likeInterproscan
IPR024576DomainRibosomal RNA methyltransferase Spb1, domain of unknown function DUF3381Interproscan
IPR050082FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10920RIBOSOMAL RNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0008649Molecular FunctionrRNA methyltransferase activityInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008650Molecular FunctionrRNA (uridine-2'-O-)-methyltransferase activityInterproscan
GO:0016435Molecular FunctionrRNA (guanine) methyltransferase activityInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0032259Biological ProcessmethylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14857SPB1, FTSJ3; AdoMet-dependent rRNA methyltransferase SPB1EC:2.1.1.-
Ribosome biogenesisko03009deepkoala

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