Detailed information of ANN23616-RA in Montipora grisea

Genomic Location: Scaffold_30__1_contigs__length_1402442:811064...811783
NR annotation: MBX2851449.1, tRNA pseudouridine(55) synthase TruB [Phycisphaeraceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6KZJ9tRNA pseudouridine synthase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=truB PE=3 SV=1
A6LEL7tRNA pseudouridine synthase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=truB PE=3 SV=1
Q5LJ29tRNA pseudouridine synthase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=truB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03177truB, PUS4, TRUB1; tRNA pseudouridine55 synthaseEC:5.4.99.25
Transfer RNA biogenesisko03016deepkoala

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