Gene detail

Detailed information of ANN23699-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:27730622...27733903
NR annotation: XP_020619340.1, plexin-A3-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6BEA0	Plexin-A4 OS=Danio rerio OX=7955 GN=plxna4 PE=2 SV=1
Q80UG2	Plexin-A4 OS=Mus musculus OX=10090 GN=Plxna4 PE=1 SV=3
Q9HCM2	Plexin-A4 OS=Homo sapiens OX=9606 GN=PLXNA4 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001614 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01403 all species →	Sema	Sema domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036352 all species →	Homologous_superfamily	Sema domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001627 all species →	Domain	Sema domain	Interproscan
IPR031148 all species →	Family	Plexin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22625 all species →	PLEXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0002116 all species →	Cellular Component	semaphorin receptor complex	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0017154 all species →	Molecular Function	semaphorin receptor activity	Interproscan
GO:0030334 all species →	Biological Process	regulation of cell migration	Interproscan
GO:0071526 all species →	Biological Process	semaphorin-plexin signaling pathway	Interproscan
GO:1902287 all species →	Biological Process	semaphorin-plexin signaling pathway involved in axon guidance	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN23699-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.