Gene detail

Detailed information of ANN23740-RA in Montipora grisea

Genomic Location: Scaffold_32__1_contigs__length_1346606:283207...284844
NR annotation: MCE2432481.1, acetyl-CoA carboxylase biotin carboxylase subunit [Candidatus Latescibacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q06862	Biotin carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accC PE=3 SV=1
P49787	Biotin carboxylase 1 OS=Bacillus subtilis (strain 168) OX=224308 GN=accC1 PE=3 SV=3
Q58626	Pyruvate carboxylase subunit A OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=pycA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004709 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01597 all species →	GCV_H	Glycine cleavage H-protein	Domain	Interproscan
PF00289 all species →	Biotin_carb_N	Biotin carboxylase, N-terminal domain	Domain	Interproscan
PF02786 all species →	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF02785 all species →	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033753 all species →	Family	Glycine cleavage system H-protein/Simiate	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan
IPR051602 all species →	Family	Acetyl-CoA Carboxylase Biotin Carboxylase Component	Interproscan
IPR005481 all species →	Domain	Biotin carboxylase-like, N-terminal domain	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR002930 all species →	Family	Glycine cleavage system H-protein	Interproscan
IPR011054 all species →	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR016185 all species →	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR011764 all species →	Domain	Biotin carboxylation domain	Interproscan
IPR017453 all species →	Family	Glycine cleavage system H-protein, subgroup	Interproscan
IPR005479 all species →	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR000089 all species →	Domain	Biotin/lipoyl attachment	Interproscan
IPR005482 all species →	Domain	Biotin carboxylase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48095 all species →	PYRUVATE CARBOXYLASE SUBUNIT A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005960 all species →	Cellular Component	glycine cleavage complex	Interproscan
GO:0019464 all species →	Biological Process	glycine decarboxylation via glycine cleavage system	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01961	accC; acetyl-CoA carboxylase, biotin carboxylase subunit	EC:6.4.1.2 EC:6.3.4.14	Fatty acid biosynthesis	ko00061	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.