Detailed information of ANN23818-RA in Montipora grisea

Genomic Location: Scaffold_31__1_contigs__length_1398629:427725...428750
NR annotation: RKU08567.1, RNA pseudouridine synthase [Candidatus Poribacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q45480Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus subtilis (strain 168) OX=224308 GN=ylyB PE=3 SV=3
Q9JVB6Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=rluD PE=3 SV=1
Q9K0B0Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58) OX=122586 GN=rluD PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01479S4S4 domainDomainInterproscan
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan
IPR002942DomainRNA-binding S4 domainInterproscan
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06180rluD; 23S rRNA pseudouridine1911/1915/1917 synthaseEC:5.4.99.23
Ribosome biogenesisko03009deepkoala

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