Genomic Location: chr6:54240348...54241286
NR annotation: CAB3999925.1, Retrovirus-related Pol poly from transposon TNT 1-94, partial [Paramuricea clavata]
Species Nanomia septata · all data for this species · gene families
| CDS |
| ANN23917-RA |
| Transcript |
| ANN23917-RA |
| Protein |
| ANN23917-RA |
| UniProt accession | Description |
|---|---|
| P10978 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000038 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00098 all species → | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| PF14223 all species → | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001878 all species → | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR036875 all species → | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47481 all species → | - | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
ANN23917-RA.
