Detailed information of ANN23924-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:31839154...31868319
NR annotation: CAH3014476.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15439ATP-binding cassette sub-family C member 4 OS=Homo sapiens OX=9606 GN=ABCC4 PE=1 SV=3
E9Q236ATP-binding cassette sub-family C member 4 OS=Mus musculus OX=10090 GN=Abcc4 PE=1 SV=1
F1M3J4ATP-binding cassette subfamily C member 4 OS=Rattus norvegicus OX=10116 GN=Abcc4 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047083DomainATP-binding cassette sub-family C member 4, six-transmembrane helical domain 2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR050173FamilyATP-binding cassette transporter CInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24223ATP-BINDING CASSETTE SUB-FAMILY CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05673ABCC4; ATP-binding cassette, subfamily C (CFTR/MRP), member 4-Transportersko02000deepkoala

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