Detailed information of ANN24116-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:35120929...35142155
NR annotation: XP_020619868.1, sodium channel and clathrin linker 1-like isoform X2 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96NL6Sodium channel and clathrin linker 1 OS=Homo sapiens OX=9606 GN=SCLT1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003174 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15964
all species →		CCCAPCentrosomal colon cancer autoantigen protein familyCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031887
all species →		FamilySerologically defined colon cancer antigen 8Interproscan
IPR038911
all species →		FamilySodium channel and clathrin linker 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35970
all species →		SODIUM CHANNEL AND CLATHRIN LINKER 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005813
all species →		Cellular ComponentcentrosomeInterproscan
GO:0007098
all species →		Biological Processcentrosome cycleInterproscan
GO:0005814
all species →		Cellular ComponentcentrioleInterproscan
GO:0045162
all species →		Biological Processclustering of voltage-gated sodium channelsInterproscan
GO:0060271
all species →		Biological Processcilium assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN24116-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP