Gene detail

Detailed information of ANN24152-RA in Montipora grisea

Genomic Location: Scaffold_34__1_contigs__length_1195499:797094...800620
NR annotation: MCE2450137.1, ABC transporter ATP-binding protein [Candidatus Latescibacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN24152-RA

ATGTTTGGTCCGTTTGCCCTCTACGTGCGGCCCTATCGACACCGCATCCTGCTCGGCGCACTCTGCATCGGGCTGGGGCAGGCGGCCACGGCGCGCATCCCGCTGCTGGTGGGCGATGCCATCGATGCGGTCTCGGCAACCGCTGGCACCTTGGGCAACATCGAGCCGTACGTCTTCTCCATCCTCGCCTACGCTTTGGGCGTGGCCCTGTGCGGGTACGCCATGCGCCTGCTGCTCGGCCGCGCTGCCAACCGCATCGAATACGACATCCGCACCGCGTATTTCGCCCACCTACTCGAGCTGCCGCCCTCGTACTACCAGCAGCGCCGCACCGGCGACCTCATGGCTCGGGCGACCAACGACCTACATGCAGTGCATATTTTTTGGGTCTATGGCGTTCGCGGCATCGTCGATACCGCTTTAGGGCTGACCTTCACCATCGCCTGTATGTGCTTGCTCGACTGGCAGTTGGCCCTGCTCGTGCTGGTGCCCCTGCCGCTGTTTAGCGTCTTGATGATCCGCATTGCCGCGGTCATCAATCTCCGCTACAAGGCCATCCAAGAGTACTTTGGTCGGATCAGCACCTTCATCCAAGAAAACCTCTCGGGCATCCGCGTAGTGCGGGCCTACACCCAAGAGCTGGCGCAAACCGCCGCGTTCGACCGGCTCAACCGGGCGTACCGCGAAAAAAACCGCGCCTACATCCACACGCGCGCCAACTACCGGCCCCTGTCCTACGTCATCGCCGCGCTTTGCTTGGGGCTGAACTTGTGGCTGGGCGGGCGCGCCGTCCTCGAGGGCGGGCTCAGCCTCGGGGCATTCGTGGCCTTCAACGCCTACCTAACCCAACTCATCCGCCCGATCATGTACAGCGGCTGGGTCATCGACCGCGCCCAGCACGCCCGCGTGTCCATGCAGCGCATCAACGAGGTGCTCGCGGTCGAGCCCGAAATTCGCGACGCCGCCCTGCCGCCCCCCGCCAACAAGTCGCACCCCATCGCCGGGCACATTGCCTTCCGCCAGCTCAGTTTCTCCTACGGCCAATCCCCGGTCCTACAGCAGATCGATCTCGAGATTCCCCAAGGCACGACCCTCGGCCTCATCGGCCGCGTCGGCTCGGGCAAGACCACGCTGGCGCGCCTCGTGCCGCGCTTGATCCAAGCCGGGCCGGGCCAGCTACTCATCGACGGCGTGCCGGTCGAGGAGTGGCCGCTGGCAACCTTGCGCGACGCCATCGGCTACGTCCCGCAAAACCCCTTTTTGTTTTCCAATACCCTCCATGCCAACATCGCTTACGGCCTCGACGCGGGCACAGCGGCCCCAATTCGCGCAGCGGCCACAGCGGCCCAGCTCAAAAAGGACATCGACCAATTCGACGCCGGCTTCAATACCCTCATCGGCGAGCGCGGCGTCACTTTGTCCGGCGGCCAGAAGCAGCGCACGACCTTGGCCCGAGCGCTCATTCGCCGCCCGCCGATCCTCATCCTCGACGACGCCCTCTCTGCGGTGGACACCCACACTGAGGAAGCCATCCTCGAGCACTTGCGCTCCCTCATGCAGGGCCGCACCACGCTCATCATCGCCCATCGCATCTCGACCCTGCGCCACGCCGACCACATCGCAGTGCTCGAAGCGGGCCGCATCGCCGAGCAGGGCACCCACGACGAGCTCGTCGAGCGCGGCGGCTTGTACGCCGAGCTGTACCAGCGCCAGCAACTAAGCGCCGAACTGGAAACCCTGCTGACCCTGCAACTTTTGGCGTATCTCAAGCCCCACCGCGGGCGCGTGGTGCTCGCCTTCAGCACCATCGCGCTCGCGGCCGGCTCCGGCCAGATCGGCCCCTATCTGACGCAGGTGGCGGTTGACGACTACATCGCGGTCGGCGATTGGACGGGGTTGCAGTGGATGATCGCGGCGTTCTTTTGCAGCGTCGCCGTGCAGTACGGTGCCCAATACGCCCAGACCTTAGTAACCGGCATGATCGGCCAAAGCGTCATGTACGACATGCGCCGCGACCTGTTTGCCCACTTGCAACGGCTGCCGCTGCGCTACTTCGACCGCACGCCGTTGGGCCGCATCATGACCCGCACCACCAACGACATTGACGCCCTCAACGAGTTTTTCAGCGAGGGCGTGGTCTCGGTCTTTATGGACTTGTTCACCCTGCTGGCCATCGTCGGCTTCATGGCCTATATCGACTTTGAGTTGGCCCTGATCTGCTGCGCGGTGGTCCCGGTCATCGCCACCTCGACCTTCTACCTCCAGGGCCTAGCCATGCGCGCCTATCGCGAGTTGCGCACACGCTTGGCGCGGCTCAATGCCTATTTGCAGGAGAACATCACCGGCGTGGAGGTGGTACAACTGTTCAACCGCCAGCAGCGCAATTTGCGCGACTTTGAGGCCGAGCACTTGCCCTATCGCCGCGCTGAGGACCGCGAGATCCACTGCTATGCCATCTTCTTCCCGTTCACCGAGTTGCTCGGCACCGTCGGCATGGTGCTGGTGCTGTGGTACGGGGCCGGGGCCGTGTTCGACGGCCGCATCGAGCCGGGGGTGCTAGTGGCCTTCCTCCAGTACATCCGCCGCTTCTTCCGCCCGATCATGGACATCTCCGACCGCTATGCCCTGTTGCAGAGCGCTATGGCCGCCTCCGAGCGCATCTTCGAGCTGTTGGCCGTGCCCGGCGAACCCGCCGGTGGGGCGCGGCACCCGCGGCCCGCGGCTCGCCGCGGCGGCGCGATTGAATTCCGCAACGTATTCTTCAAGTACGATCCCGCGGCCGCCGACTGGATCCTCGAGGATGTCTCGTTTGAACTACCGGCCGGGCAGAGCCTAGCGCTGGTGGGGGCCACCGGCTCGGGCAAGACCACCATCGTCAGCCTCCTCTGCCGCTTCTACGACATCCAGCGCGGGGCCATCCTCGTCGATGGCTGCGACGTGCGCCAGTGGGATGCGGCCGCGTTGCGCCGCCGCATCAGCATCGTCCAGCAGGAGGTCTTCTTGTTTTCCGGGACTGTCCGCGGCAACATCCGCCTCGGCGAGACTGCCATTGACGACGCCCAAGTCGAGCGCGCGGCCCGCTACGTCAACGCCGCGCCCTTTATCGAACGCCTGCCCCAAGGCTATGCCCACGCCGTGGCCGAAGGCGGATCGACCCTGTCGGCCGGCCAGCGCCAGTTAGTGGCCTTTGCCCGCGCCCTCGCCTTTGACCCGGCCATCCTCGTCCTCGACGAGGCCACCTCCAGCATCGACACCGAGACCGAACAGCTCATTCAAGACGCCATCGCCAAGCTGATGCGCGAGCGCACCTCCATCGTCATCGCCCACCGCCTCTCTACCATCCGCAGTGCCGACCAGATCTTGGTGATGCACCGCGGCCAAGTGCGCGAGCGGGGCCGCCACGACGAGCTGTTGCTTCAAGGCGGCATCTATGCGCGACTCCACCGGCTCAACTACGGCGGCCGGGCTTAG

Transcript

ANN24152-RA

Protein

Uniprot

Uniprot term	Description
O53645	Multidrug efflux ATP-binding/permease protein Rv0194 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv0194 PE=1 SV=1
A1KF14	Multidrug efflux ATP-binding/permease protein BCG_0231 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) OX=410289 GN=BCG_0231 PE=1 SV=1
Q6YUU5	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190300 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06147	ABCB-BAC; ATP-binding cassette, subfamily B, bacterial	-	Transporters	ko02000	deepkoala