Detailed information of ANN24209-RA in Montipora grisea

Genomic Location: Scaffold_61__1_contigs__length_416030:269630...271741
NR annotation: MCG8593960.1, polyribonucleotide nucleotidyltransferase [Kiloniellales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B6IVG3Polyribonucleotide nucleotidyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=pnp PE=3 SV=1
Q2VZQ4Polyribonucleotide nucleotidyltransferase OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=pnp PE=3 SV=1
Q2RMR6Polyribonucleotide nucleotidyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=pnp PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00575S1S1 RNA binding domainDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003029DomainS1 domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004087DomainK Homology domainInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR015848DomainPolyribonucleotide nucleotidyltransferase, RNA-binding domainInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR004088DomainK Homology domain, type 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00962pnp, PNPT1; polyribonucleotide nucleotidyltransferaseEC:2.7.7.8
Transfer RNA biogenesisko03016deepkoala

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