Detailed information of ANN24253-RA in Montipora grisea

Genomic Location: Scaffold_36__1_contigs__length_1058503:492000...504116
NR annotation: MBL9119504.1, hypothetical protein [Phycisphaerae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
O35161Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus OX=10090 GN=Celsr1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF13860FlgD_igFlgD Ig-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR050971FamilyCadherin domain-containing proteinInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR025965DomainFlgD/Vpr, Ig-like domainInterproscan
IPR026444DomainSecretion system C-terminal sorting domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24025DESMOGLEIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

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