Genomic Location: Scaffold_36__1_contigs__length_1058503:726196...728157
NR annotation: MXX38042.1, DNA topoisomerase (ATP-hydrolyzing) subunit B [Gemmatimonadota bacterium]
Species Montipora grisea · all data for this species · gene families
| CDS |
| ANN24265-RA |
| Transcript |
| ANN24265-RA |
| Protein |
| ANN24265-RA |
| UniProt accession | Description |
|---|---|
| P05652 | DNA gyrase subunit B OS=Bacillus subtilis (strain 168) OX=224308 GN=gyrB PE=3 SV=1 |
| O50627 | DNA gyrase subunit B OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=gyrB PE=3 SV=1 |
| P94604 | DNA gyrase subunit B OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) OX=272562 GN=gyrB PE=3 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0010595 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02518 all species → | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Domain | Interproscan |
| PF01751 all species → | Toprim | Toprim domain | Family | Interproscan |
| PF00986 all species → | DNA_gyraseB_C | DNA gyrase B subunit, carboxyl terminus | Family | Interproscan |
| PF00204 all species → | DNA_gyraseB | DNA gyrase B | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014721 all species → | Homologous_superfamily | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Interproscan |
| IPR003594 all species → | Domain | Histidine kinase/HSP90-like ATPase | Interproscan |
| IPR001241 all species → | Family | DNA topoisomerase, type IIA | Interproscan |
| IPR018522 all species → | Conserved_site | DNA topoisomerase, type IIA, conserved site | Interproscan |
| IPR006171 all species → | Domain | TOPRIM domain | Interproscan |
| IPR036890 all species → | Homologous_superfamily | Histidine kinase/HSP90-like ATPase superfamily | Interproscan |
| IPR002288 all species → | Domain | DNA gyrase B subunit, C-terminal | Interproscan |
| IPR011557 all species → | Family | DNA gyrase, subunit B | Interproscan |
| IPR013759 all species → | Homologous_superfamily | DNA topoisomerase, type IIA, subunit B, C-terminal | Interproscan |
| IPR000565 all species → | Family | DNA topoisomerase, type IIA, subunit B | Interproscan |
| IPR013506 all species → | Domain | DNA topoisomerase, type IIA, subunit B, domain 2 | Interproscan |
| IPR013760 all species → | Homologous_superfamily | DNA topoisomerase, type IIA-like domain superfamily | Interproscan |
| IPR020568 all species → | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45866 all species → | DNA GYRASE/TOPOISOMERASE SUBUNIT B | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003918 all species → | Molecular Function | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006265 all species → | Biological Process | DNA topological change | Interproscan |
| GO:0005694 all species → | Cellular Component | chromosome | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02470 | gyrB; DNA gyrase subunit B | EC:5.6.2.2 | DNA repair and recombination proteins | ko03400 | deepkoala |
