Gene detail

Detailed information of ANN24353-RA in Leptoseris scabra

Genomic Location: Scaffold_1__1_contigs__length_42512999:39448944...39453343
NR annotation: XP_029188428.1, transmembrane protein 216-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7EYQ9	Transmembrane protein 216 OS=Danio rerio OX=7955 GN=tmem216 PE=3 SV=1
B6ID01	Transmembrane protein 216 OS=Rattus norvegicus OX=10116 GN=Tmem216 PE=2 SV=2
Q9CQC4	Transmembrane protein 216 OS=Mus musculus OX=10090 GN=Tmem216 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008345 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09799 all species →	Transmemb_17	Predicted membrane protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019184 all species →	Family	Uncharacterised protein family, transmembrane-17	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13531 all species →	GEO07735P1-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035869 all species →	Cellular Component	ciliary transition zone	Interproscan
GO:1905515 all species →	Biological Process	non-motile cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19385	TMEM216; transmembrane protein 216	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.