Detailed information of ANN24499-RA in Montipora grisea

Genomic Location: Scaffold_1127__1_contigs__length_61524:203...8232
NR annotation: XP_036351171.1, hemicentin-1 [Ochotona princeps]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00047igImmunoglobulin domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR013106DomainImmunoglobulin V-set domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

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